Thread ersten beiden Zeilen eines files speichern (12 answers)
Opened by paidopoieo at 2006-01-04 03:16

paidopoieo
 2006-01-05 03:25
#61494 #61494
User since
2005-12-02
96 Artikel
BenutzerIn
[default_avatar]
hi,
ein Auszug aus der Datei:

Code: (dl )
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
ref|XP_473071.1|-->OSJNBa0014K14.2 [Oryza sativa (japonica cultivar-group)] emb|CAE02929.3| OSJNBa0014K14.1 [Oryza sativa (japonica cultivar-group)]
Seq:     746  WRWRWRWW  753
ref|XP_473071.1|-->OSJNBa0014K14.2 [Oryza sativa (japonica cultivar-group)] emb|CAE02929.3| OSJNBa0014K14.1 [Oryza sativa (japonica cultivar-group)]
Seq:     744  WRWRWRW  750
dbj|BAD87001.1|-->hypothetical protein [Oryza sativa (japonica cultivar-group)] dbj|BAD86933.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Seq:     51  WRWRWRWW  58
dbj|BAD87001.1|-->hypothetical protein [Oryza sativa (japonica cultivar-group)] dbj|BAD86933.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Seq:     49  WRWRWRW  55
gb|AAX96019.1|-->hypothetical protein LOC_Os11g07590 [Oryza sativa (japonica cultivar-group)] gb|ABA91724.1| hypothetical protein LOC_Os11g07590 [Oryza sativa (japonica cultivar-group)]
Seq:     77  WWWRRRWW  84
ref|XP_463574.1|-->P0497A05.2 [Oryza sativa (japonica cultivar-group)] dbj|BAB92559.1| P0497A05.2 [Oryza sativa (japonica cultivar-group)]
Seq:     124  WRWRWRWW  131
ref|XP_720804.1|-->hypothetical protein CaO19_13829 [Candida albicans SC5314] gb|EAL01978.1| hypothetical protein CaO19.13829 [Candida albicans SC5314]
Seq:     28  WWKWRW  33
dbj|BAE44752.1|-->hypothetical protein [Candida albicans] ref|XP_721316.1| hypothetical protein CaO19.6475 [Candida albicans SC5314] gb|EAL02511.1| hypothetical protein CaO19.6475 [Candida albicans SC5314] ref|XP_888855.1| hypothetical protein CaJ7.0276 [Candida albicans SC5314]
Seq:     28  WWKWRW  33
ref|ZP_00245446.1|-->COG0665: Glycine/D-amino acid oxidases (deaminating) [Rubrivivax gelatinosus PM1]
Seq:     86  WRWLWRWW  93
gb|AAM90664.1|-->putative pyruvate kinase [Deschampsia antarctica]
Seq:     11  WWKWWLRRWW  20
gb|AAM90664.1|-->putative pyruvate kinase [Deschampsia antarctica]
Seq:     19  WWKWWLRRWW  28
gb|AAM90664.1|-->putative pyruvate kinase [Deschampsia antarctica]
Seq:     6  WWLRRWW  12


schlussendlich sollte die Datei dann folgendermassen aussehen:

Code: (dl )
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
ref|XP_473071.1|-->OSJNBa0014K14.2 [Oryza sativa (japonica cultivar-group)] emb|CAE02929.3| OSJNBa0014K14.1 [Oryza sativa (japonica cultivar-group)]
Seq:     746  WRWRWRWW  753
Seq:     744  WRWRWRW  750
dbj|BAD87001.1|-->hypothetical protein [Oryza sativa (japonica cultivar-group)] dbj|BAD86933.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Seq:     51  WRWRWRWW  58
Seq:     49  WRWRWRW  55
gb|AAX96019.1|-->hypothetical protein LOC_Os11g07590 [Oryza sativa (japonica cultivar-group)] gb|ABA91724.1| hypothetical protein LOC_Os11g07590 [Oryza sativa (japonica cultivar-group)]
Seq:     77  WWWRRRWW  84
ref|XP_463574.1|-->P0497A05.2 [Oryza sativa (japonica cultivar-group)] dbj|BAB92559.1| P0497A05.2 [Oryza sativa (japonica cultivar-group)]
Seq:     124  WRWRWRWW  131
ref|XP_720804.1|-->hypothetical protein CaO19_13829 [Candida albicans SC5314] gb|EAL01978.1| hypothetical protein CaO19.13829 [Candida albicans SC5314]
Seq:     28  WWKWRW  33
dbj|BAE44752.1|-->hypothetical protein [Candida albicans] ref|XP_721316.1| hypothetical protein CaO19.6475 [Candida albicans SC5314] gb|EAL02511.1| hypothetical protein CaO19.6475 [Candida albicans SC5314] ref|XP_888855.1| hypothetical protein CaJ7.0276 [Candida albicans SC5314]
Seq:     28  WWKWRW  33
ref|ZP_00245446.1|-->COG0665: Glycine/D-amino acid oxidases (deaminating) [Rubrivivax gelatinosus PM1]
Seq:     86  WRWLWRWW  93
gb|AAM90664.1|-->putative pyruvate kinase [Deschampsia antarctica]
Seq:     11  WWKWWLRRWW  20
Seq:     19  WWKWWLRRWW  28
Seq:     6  WWLRRWW  12


hab mir die Zeilen auch ausgeben lassen, die stimmen, da steht genau das drinnen was drinnen sein sollte, jedoch uebergeht es die if bedingung...

Output:
Code: (dl )
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
opened file and stored content in array 
intialized variables unique 

entered for loop 
trying to perform 1 if 
ref|XP_473071.1|-->OSJNBa0014K14.2 [Oryza sativa (japonica cultivar-group)] emb|CAE02929.3| OSJNBa0014K14.1 [Oryza sativa (japonica cultivar-group)]
ref|XP_473071.1|-->OSJNBa0014K14.2 [Oryza sativa (japonica cultivar-group)] emb|CAE02929.3| OSJNBa0014K14.1 [Oryza sativa (japonica cultivar-group)]
Seq:     746  WRWRWRWW  753
Seq:     744  WRWRWRW  750
increased variables 

entered for loop 
trying to perform 1 if 
ref|XP_473071.1|-->OSJNBa0014K14.2 [Oryza sativa (japonica cultivar-group)] emb|CAE02929.3| OSJNBa0014K14.1 [Oryza sativa (japonica cultivar-group)]
dbj|BAD87001.1|-->hypothetical protein [Oryza sativa (japonica cultivar-group)] dbj|BAD86933.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Seq:     744  WRWRWRW  750
Seq:     51  WRWRWRWW  58
increased variables 

entered for loop 
trying to perform 1 if 
ref|XP_473071.1|-->OSJNBa0014K14.2 [Oryza sativa (japonica cultivar-group)] emb|CAE02929.3| OSJNBa0014K14.1 [Oryza sativa (japonica cultivar-group)]
dbj|BAD87001.1|-->hypothetical protein [Oryza sativa (japonica cultivar-group)] dbj|BAD86933.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Seq:     51  WRWRWRWW  58
Seq:     49  WRWRWRW  55
increased variables


ich hab keine Ahnung wieso er mir nicht in die if bedingung reingeht...

Danke

View full thread ersten beiden Zeilen eines files speichern